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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs34603905 chr15:99232681 T/TC PRHOXNB chr13:28552243-28562774:- -0.61 -8.26 5.0E-11 Box Plot
ACC rs34635362 chr13:60793385 T/C PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs34710117 chr7:99458505 A/ATT RESP18 chr2:220192131-220197899:- 0.96 8.53 1.84E-11 Box Plot
ACC rs34753043 chr13:60783189 A/C PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs34794617 chr13:57378720 TA/T MAGEA4 chrX:151080981-151093642:+ 1.19 7.61 5.36E-10 Box Plot
ACC rs34883440 chr15:79555005 T/C PRHOXNB chr13:28552243-28562774:- 0.59 7.65 4.54E-10 Box Plot
ACC rs34965178 chr8:4184721 T/A OR6C3 chr12:55725485-55726420:+ 0.66 8.07 9.71E-11 Box Plot
ACC rs35175395 chr13:60783961 GA/G PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs35315790 chr2:86822275 C/CTT PRHOXNB chr13:28552243-28562774:- 0.69 9.82 1.97E-13 Box Plot
ACC rs35460033 chr8:4183716 C/G OR6C3 chr12:55725485-55726420:+ 0.64 7.6 5.51E-10 Box Plot
ACC rs35520010 chr8:4185019 T/G OR6C3 chr12:55725485-55726420:+ 0.66 8.07 9.71E-11 Box Plot
ACC rs35522058 chr5:14090768 A/G PRHOXNB chr13:28552243-28562774:- 0.61 8.22 5.63E-11 Box Plot
ACC rs35647207 chr6:148362353 T/TC PRHOXNB chr13:28552243-28562774:- 0.55 7.76 3.11E-10 Box Plot
ACC rs35781626 chr10:34014629 G/T GAGE2D chrX:49207160-49214420:+ 0.59 7.7 3.86E-10 Box Plot
ACC rs35804316 chr2:194863995 C/A PRHOXNB chr13:28552243-28562774:- 0.72 8.92 4.69E-12 Box Plot